miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|180095819|gb|FF368407.1|FF368407 ATGATTTCGGCGACTTGCTTTGGCGGCGCTTTGTTTAGGTTATATTTTTCAATTTCTAGGTAAAAGAAGTAAACAGCAAA
AATGGCGGCGGCTATGCCAATCAACCCTAAACCCTTCCTGAACAGTCTTACTGGCAAATCAGTACTTGTAAAACTAAAAT
GGGGCCACGAATACAAAGGATTACTAGTGTCGGCCGATGGATACATGAACTTGCAACTAGCAAACACTGAGGAAATCGTC
GACGGCTCATGTACAGGTAATCTTGGAGAAGTTCTTATTAGGTGTAATAATGTTCTCTATGTAAGAGGCGCCGAGGAAGA
AGATG




Most similar to sp|Q24297|RUXF_DROME

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q24297|RUXF_DROME Small nuclear ribonucleoprotein F
           OS=Drosophila melanogaster GN=DebB PE=1 SV=2
          Length = 88

 Score =  136 bits (342), Expect = 5e-32
 Identities = 61/76 (80%), Positives = 69/76 (90%)
 Frame = +1

Query: 97  PINPKPFLNSLTGKSVLVKLKWGHEYKGLLVSADGYMNLQLANTEEIVDGSCTGNLGEVL 276
           PINPKPFLN LTGK VLVKLKWG EYKG LVS DGYMN+QLANTEE+++GS TGNLGEVL
Sbjct: 6   PINPKPFLNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVIEGSVTGNLGEVL 65

Query: 277 IRCNNVLYVRGAEEED 324
           IRCNNVLY++G E++D
Sbjct: 66  IRCNNVLYIKGMEDDD 81